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Cell cycle regulation gene transcriptions

Introduction

Associate Editor(s)-in-Chief: Henry A. Hoff

Consensus sequences

Consensus sequences

Cell cycle regulation (CCCAACGGT).[1]

Samplings

Samplings

Main article: Model samplings

Samplings

Copying 5′-CCCAACGGT-3′ into ⌘F has found no elements in either promoter of A1BG.

For the Basic programs testing consensus sequence 5′-CCCAACGGT-3′ (starting with SuccessablesCell.bas) written to compare nucleotide sequences with the sequences on either the template strand (-), or coding strand (+), of the DNA, in the negative direction (-), or the positive direction (+), the programs are, are looking for, and found:

  1. negative strand, negative direction, looking for 5′-CCCAACGGT-3′, 0.
  2. negative strand, positive direction, looking for 5′-CCCAACGGT-3′, 0.
  3. positive strand, negative direction, looking for 5′-CCCAACGGT-3′, 0.
  4. positive strand, positive direction, looking for 5′-CCCAACGGT-3′, 0.
  5. complement, negative strand, negative direction, looking for 5′-GGGTTGCCA-3′, 0.
  6. complement, negative strand, positive direction, looking for 5′-GGGTTGCCA-3′, 0.
  7. complement, positive strand, negative direction, looking for 5′-GGGTTGCCA-3′, 0.
  8. complement, positive strand, positive direction, looking for 5′-GGGTTGCCA-3′, 0.
  9. inverse complement, negative strand, negative direction, looking for 5′-ACCGTTGGG-3′, 0.
  10. inverse complement, negative strand, positive direction, looking for 5′-ACCGTTGGG-3′, 0.
  11. inverse complement, positive strand, negative direction, looking for 5′-ACCGTTGGG-3′, 0.
  12. inverse complement, positive strand, positive direction, looking for 5′-ACCGTTGGG-3′, 0.
  13. inverse negative strand, negative direction, looking for 5′-TGGCAACCC-3′, 0.
  14. inverse negative strand, positive direction, looking for 5′-TGGCAACCC-3′, 0.
  15. inverse positive strand, negative direction, looking for 5′-TGGCAACCC-3′, 0.
  16. inverse positive strand, positive direction, looking for 5′-TGGCAACCC-3′, 0.
Acknowledgements

Acknowledgements

The content on this page was first contributed by: Henry A. Hoff.

See also

See also

References

References

  1. ↑ Bhaskar Sharma & Joemar Taganna (12 June 2020). “Genome-wide analysis of the U-box E3 ubiquitin ligase enzyme gene family in tomato”. Scientific Reports. 10 (9581). doi:10.1038/s41598-020-66553-1. PMID 32533036 Check |pmid= value (help). Retrieved 27 August 2020.
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