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XIST (gene)
Introduction
X (inactive)-specific transcript, also known as XIST, is a human gene.[1]
X inactivation is an early developmental process in mammalian females that transcriptionally silences one of the pair of X chromosomes, thus providing dosage equivalence between males and females. The process is regulated by several factors, including a region of chromosome X called the X inactivation center (XIC). The XIST gene is expressed exclusively from the XIC of the inactive X chromosome. The transcript is spliced but apparently does not encode a protein. The transcript remains in the nucleus where it coats the inactive X chromosome. Alternatively spliced transcript variants have been identified, but their full length sequences have not been determined. Mutations in the XIST promoter cause familial skewed X inactivation.[1]
Further reading
Further reading
- Brown CJ, Hendrich BD, Rupert JL; et al. (1992). “The human XIST gene: analysis of a 17 kb inactive X-specific RNA that contains conserved repeats and is highly localized within the nucleus”. Cell. 71 (3): 527β42. PMIDΒ 1423611.
- Brown CJ, Ballabio A, Rupert JL; et al. (1991). “A gene from the region of the human X inactivation centre is expressed exclusively from the inactive X chromosome”. Nature. 349 (6304): 38β44. doi:10.1038/349038a0. PMIDΒ 1985261.
- Brown CJ, Lafreniere RG, Powers VE; et al. (1991). “Localization of the X inactivation centre on the human X chromosome in Xq13”. Nature. 349 (6304): 82β4. doi:10.1038/349082a0. PMIDΒ 1985270.
- Brockdorff N, Ashworth A, Kay GF; et al. (1991). “Conservation of position and exclusive expression of mouse Xist from the inactive X chromosome”. Nature. 351 (6324): 329β31. doi:10.1038/351329a0. PMIDΒ 2034279.
- Clemson CM, McNeil JA, Willard HF, Lawrence JB (1996). “XIST RNA paints the inactive X chromosome at interphase: evidence for a novel RNA involved in nuclear/chromosome structure”. J. Cell Biol. 132 (3): 259β75. PMIDΒ 8636206.
- Herzing LB, Romer JT, Horn JM, Ashworth A (1997). “Xist has properties of the X-chromosome inactivation centre”. Nature. 386 (6622): 272β5. doi:10.1038/386272a0. PMIDΒ 9069284.
- Hendrich BD, Plenge RM, Willard HF (1997). “Identification and characterization of the human XIST gene promoter: implications for models of X chromosome inactivation”. Nucleic Acids Res. 25 (13): 2661β71. PMIDΒ 9185579.
- Plenge RM, Hendrich BD, Schwartz C; et al. (1997). “A promoter mutation in the XIST gene in two unrelated families with skewed X-chromosome inactivation”. Nat. Genet. 17 (3): 353β6. doi:10.1038/ng1197-353. PMIDΒ 9354806.
- Hong YK, Ontiveros SD, Strauss WM (2000). “A revision of the human XIST gene organization and structural comparison with mouse Xist”. Mamm. Genome. 11 (3): 220β4. PMIDΒ 10723727.
- Hall LL, Byron M, Sakai K; et al. (2002). “An ectopic human XIST gene can induce chromosome inactivation in postdifferentiation human HT-1080 cells”. Proc. Natl. Acad. Sci. U.S.A. 99 (13): 8677β82. doi:10.1073/pnas.132468999. PMIDΒ 12072569.
- Ganesan S, Silver DP, Greenberg RA; et al. (2002). “BRCA1 supports XIST RNA concentration on the inactive X chromosome”. Cell. 111 (3): 393β405. PMIDΒ 12419249.
- Kawakami T, Okamoto K, Sugihara H; et al. (2003). “The roles of supernumerical X chromosomes and XIST expression in testicular germ cell tumors”. J. Urol. 169 (4): 1546β52. doi:10.1097/01.ju.0000044927.23323.5a. PMIDΒ 12629412.
- Ota T, Suzuki Y, Nishikawa T; et al. (2004). “Complete sequencing and characterization of 21,243 full-length human cDNAs”. Nat. Genet. 36 (1): 40β5. doi:10.1038/ng1285. PMIDΒ 14702039.
- Ganesan S, Silver DP, Drapkin R; et al. (2004). “Association of BRCA1 with the inactive X chromosome and XIST RNA”. Philos. Trans. R. Soc. Lond., B, Biol. Sci. 359 (1441): 123β8. doi:10.1098/rstb.2003.1371. PMIDΒ 15065664.
- Pugacheva EM, Tiwari VK, Abdullaev Z; et al. (2005). “Familial cases of point mutations in the XIST promoter reveal a correlation between CTCF binding and pre-emptive choices of X chromosome inactivation”. Hum. Mol. Genet. 14 (7): 953β65. doi:10.1093/hmg/ddi089. PMIDΒ 15731119.
- Vasques LR, Stabellini R, Xue F; et al. (2007). “XIST repression in the absence of DNMT1 and DNMT3B”. DNA Res. 12 (5): 373β8. doi:10.1093/dnares/dsi013. PMIDΒ 16769694.
- Cohen HR, Panning B (2007). “XIST RNA exhibits nuclear retention and exhibits reduced association with the export factor TAP/NXF1”. Chromosoma. 116 (4): 373β83. doi:10.1007/s00412-007-0100-1. PMIDΒ 17333237.
- Chow JC, Hall LL, Baldry SE; et al. (2007). “Inducible XIST-dependent X-chromosome inactivation in human somatic cells is reversible”. Proc. Natl. Acad. Sci. U.S.A. 104 (24): 10104β9. doi:10.1073/pnas.0610946104. PMIDΒ 17537922.
- Vincent-Salomon A, Ganem-Elbaz C, ManiΓ© E; et al. (2007). “X inactive-specific transcript RNA coating and genetic instability of the X chromosome in BRCA1 breast tumors”. Cancer Res. 67 (11): 5134β40. doi:10.1158/0008-5472.CAN-07-0465. PMIDΒ 17545591.
